Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Fst-202ENSMUST00000223640 2612 ntBASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv8-28A0A0G2JE47 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm7143-201ENSMUST00000222811 859 ntBASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 AA386476-201ENSMUST00000098781 1665 ntBASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv8-28A0A0G2JE47 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Igkv8-28A0A0G2JE47 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-28A0A0G2JE47 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Igkv8-28A0A0G2JE47 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Igkv8-28A0A0G2JE47 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-28A0A0G2JE47 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Igkv8-28A0A0G2JE47 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-28A0A0G2JE47 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-28A0A0G2JE47 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms