Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-47A0A0A6YY41 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-47A0A0A6YY41 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ighv1-47A0A0A6YY41 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-47A0A0A6YY41 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-47A0A0A6YY41 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-47A0A0A6YY41 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-47A0A0A6YY41 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.33■□□□□ 0.04
Ighv1-47A0A0A6YY41 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-47A0A0A6YY41 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.31■□□□□ 0.04
Ighv1-47A0A0A6YY41 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms