Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav6n-6A0A075B6B2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-6A0A075B6B2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm43137-201ENSMUST00000198052 594 ntBASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.81□□□□□ -0.2
Trav6n-6A0A075B6B2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-6A0A075B6B2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms