Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Cdkn3-203ENSMUST00000227149 1952 ntBASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-4A0A075B654 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-4A0A075B654 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-4A0A075B654 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-4A0A075B654 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms