Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-1A0A075B644 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav13-1A0A075B644 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-1A0A075B644 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Nespas-201ENSMUST00000143738 1083 ntBASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Gm6420-201ENSMUST00000193885 723 ntBASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-1A0A075B644 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-1A0A075B644 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-1A0A075B644 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Gm13534-201ENSMUST00000121169 513 ntBASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms