Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8n-2A0A075B633 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8n-2A0A075B633 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Gm11927-201ENSMUST00000118472 759 ntBASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8n-2A0A075B633 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8n-2A0A075B633 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8n-2A0A075B633 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8n-2A0A075B633 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8n-2A0A075B633 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav8n-2A0A075B633 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav8n-2A0A075B633 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav8n-2A0A075B633 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav8n-2A0A075B633 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8n-2A0A075B633 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav8n-2A0A075B633 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8n-2A0A075B633 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.01■□□□□ 0.31
Trav8n-2A0A075B633 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms