Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Gm21956-201ENSMUST00000179946 522 ntBASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-4A0A075B631 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Gm8493-201ENSMUST00000196881 489 ntBASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-4A0A075B631 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9n-4A0A075B631 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9n-4A0A075B631 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9n-4A0A075B631 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9n-4A0A075B631 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9n-4A0A075B631 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Smad6-203ENSMUST00000179458 273 ntBASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-4A0A075B631 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-4A0A075B631 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-4A0A075B631 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms