Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Gm45444-201ENSMUST00000211394 898 ntBASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav7n-4A0A075B620 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7n-4A0A075B620 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7n-4A0A075B620 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7n-4A0A075B620 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trav7n-4A0A075B620 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7n-4A0A075B620 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7n-4A0A075B620 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7n-4A0A075B620 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7n-4A0A075B620 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms