Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4n-4A0A075B615 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Gm6311-201ENSMUST00000073790 878 ntBASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4n-4A0A075B615 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Gm16437-201ENSMUST00000025669 507 ntBASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4n-4A0A075B615 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Scarna2-201ENSMUST00000157560 414 ntBASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4n-4A0A075B615 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4n-4A0A075B615 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms