Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC8.32□□□□□ -1.08
NcanP55066 Gm45705-201ENSMUST00000211831 2134 ntBASIC8.32□□□□□ -1.08
NcanP55066 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Gm6654-201ENSMUST00000118950 348 ntBASIC8.32□□□□□ -1.08
NcanP55066 Gm11903-201ENSMUST00000118958 727 ntBASIC8.32□□□□□ -1.08
NcanP55066 Gm12104-201ENSMUST00000120359 979 ntBASIC8.32□□□□□ -1.08
NcanP55066 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.32□□□□□ -1.08
NcanP55066 Gm25433-201ENSMUST00000158283 286 ntBASIC8.32□□□□□ -1.08
NcanP55066 Gm22533-201ENSMUST00000158821 274 ntBASIC8.32□□□□□ -1.08
NcanP55066 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.32□□□□□ -1.08
NcanP55066 Gm25640-201ENSMUST00000175378 125 ntBASIC8.32□□□□□ -1.08
NcanP55066 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
NcanP55066 Gm7436-201ENSMUST00000187229 391 ntBASIC8.32□□□□□ -1.08
NcanP55066 Gm8004-201ENSMUST00000187782 617 ntBASIC8.32□□□□□ -1.08
NcanP55066 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.32□□□□□ -1.08
NcanP55066 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
NcanP55066 Gm44245-201ENSMUST00000204304 232 ntBASIC8.32□□□□□ -1.08
NcanP55066 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.32□□□□□ -1.08
NcanP55066 Gm45100-201ENSMUST00000209153 391 ntBASIC8.32□□□□□ -1.08
NcanP55066 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Gm8512-201ENSMUST00000215367 471 ntBASIC8.32□□□□□ -1.08
NcanP55066 AC073562.1-201ENSMUST00000222117 401 ntBASIC8.32□□□□□ -1.08
NcanP55066 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
NcanP55066 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.32□□□□□ -1.08
NcanP55066 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.32□□□□□ -1.08
NcanP55066 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Gm43657-201ENSMUST00000200336 3833 ntBASIC8.32□□□□□ -1.08
NcanP55066 Ldb2-207ENSMUST00000199534 2541 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
NcanP55066 Gm15925-201ENSMUST00000120641 1881 ntBASIC8.32□□□□□ -1.08
NcanP55066 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NcanP55066 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
NcanP55066 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.31□□□□□ -1.08
NcanP55066 Gm16179-201ENSMUST00000120685 373 ntBASIC8.31□□□□□ -1.08
NcanP55066 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Gm23225-201ENSMUST00000158121 114 ntBASIC8.31□□□□□ -1.08
NcanP55066 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.31□□□□□ -1.08
NcanP55066 Gm29156-201ENSMUST00000187764 499 ntBASIC8.31□□□□□ -1.08
NcanP55066 Gm44356-201ENSMUST00000196731 111 ntBASIC8.31□□□□□ -1.08
NcanP55066 AC117240.1-201ENSMUST00000199436 61 ntBASIC8.31□□□□□ -1.08
NcanP55066 Gm6063-201ENSMUST00000206958 485 ntBASIC8.31□□□□□ -1.08
NcanP55066 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 AC153968.1-201ENSMUST00000215584 334 ntBASIC8.31□□□□□ -1.08
NcanP55066 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.31□□□□□ -1.08
NcanP55066 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Gm24036-201ENSMUST00000082868 156 ntBASIC8.31□□□□□ -1.08
NcanP55066 Samd3-201ENSMUST00000060716 1874 ntAPPRIS P4 TSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.31□□□□□ -1.08
NcanP55066 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
NcanP55066 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
NcanP55066 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NcanP55066 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms