Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Gm10623-201ENSMUST00000209081 2639 ntBASIC9.06□□□□□ -0.96
Col1a1P11087 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm9378-201ENSMUST00000120315 471 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm26025-201ENSMUST00000158655 271 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.05□□□□□ -0.96
Col1a1P11087 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm5445-201ENSMUST00000180224 480 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm29144-201ENSMUST00000189235 339 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm29238-201ENSMUST00000189709 695 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm28607-201ENSMUST00000190142 339 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm28121-201ENSMUST00000191420 339 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm7341-201ENSMUST00000192183 926 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm37526-201ENSMUST00000194640 619 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm44356-201ENSMUST00000196731 111 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm5654-201ENSMUST00000217787 475 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC9.05□□□□□ -0.96
Col1a1P11087 AC108947.1-201ENSMUST00000224274 1000 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.05□□□□□ -0.96
Col1a1P11087 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col1a1P11087 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col1a1P11087 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col1a1P11087 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col1a1P11087 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col1a1P11087 Gm12635-201ENSMUST00000117285 752 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 Gm12104-201ENSMUST00000120359 979 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
Col1a1P11087 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC9.04□□□□□ -0.96
Col1a1P11087 Gm24680-201ENSMUST00000158759 126 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC9.04□□□□□ -0.96
Col1a1P11087 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Gm7412-201ENSMUST00000191692 605 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Gm43147-201ENSMUST00000196944 542 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Olfr683-201ENSMUST00000061284 960 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC9.04□□□□□ -0.96
Col1a1P11087 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Gm43071-201ENSMUST00000197233 2032 ntBASIC9.04□□□□□ -0.96
Col1a1P11087 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Col1a1P11087 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col1a1P11087 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col1a1P11087 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col1a1P11087 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 AC154747.4-203ENSMUST00000225893 1384 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms