Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm37940-201ENSMUST00000194243 3251 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm12310-201ENSMUST00000118013 492 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm13742-201ENSMUST00000118805 457 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm13651-201ENSMUST00000119086 1110 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm4773-201ENSMUST00000120392 702 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm24647-201ENSMUST00000157112 113 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm28728-201ENSMUST00000189087 405 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm42932-201ENSMUST00000197280 744 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm42429-201ENSMUST00000198579 558 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm45283-201ENSMUST00000210593 628 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm19810-201ENSMUST00000218521 251 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 AC165281.1-201ENSMUST00000225713 1011 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm5619-201ENSMUST00000071172 760 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm14099-201ENSMUST00000117769 605 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm20396-201ENSMUST00000173358 745 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Mir6999-201ENSMUST00000183498 61 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm18301-201ENSMUST00000185261 888 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm5920-201ENSMUST00000187390 853 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm8896-201ENSMUST00000197434 1106 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm18973-201ENSMUST00000205814 511 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm21321-201ENSMUST00000220179 446 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 AC154747.4-202ENSMUST00000223826 852 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC9.18□□□□□ -0.94
Vps53Q8CCB4 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.18□□□□□ -0.94
Vps53Q8CCB4 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm29113-201ENSMUST00000185991 3432 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm6746-201ENSMUST00000108774 483 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm11997-201ENSMUST00000118697 313 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm13466-201ENSMUST00000121515 999 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm15730-201ENSMUST00000121828 415 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm11688-201ENSMUST00000122145 308 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Mir5100-201ENSMUST00000174993 64 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms