Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm15501-202ENSMUST00000140687 625 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm24294-201ENSMUST00000158295 277 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm3355-201ENSMUST00000160079 487 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm15664-201ENSMUST00000160167 184 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm2541-201ENSMUST00000161209 711 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Sdc1P18828 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm44790-201ENSMUST00000204137 798 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Sdc1P18828 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm7836-201ENSMUST00000209730 432 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm7965-201ENSMUST00000211675 1105 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.24□□□□□ -1.41
Sdc1P18828 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sdc1P18828 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Sdc1P18828 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm43435-201ENSMUST00000199996 1438 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 L3mbtl3-203ENSMUST00000174766 3411 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC6.23□□□□□ -1.41
Sdc1P18828 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Sdc1P18828 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 AC124675.1-201ENSMUST00000226263 1390 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Trdv2-1-201ENSMUST00000103677 345 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm12310-201ENSMUST00000118013 492 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm8163-201ENSMUST00000122020 1060 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Gm22481-201ENSMUST00000122562 192 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC6.23□□□□□ -1.41
Sdc1P18828 E130120K24Rik-201ENSMUST00000129910 556 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm16301-201ENSMUST00000161959 295 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm23187-201ENSMUST00000175746 86 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Gm7083-201ENSMUST00000178617 450 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC6.23□□□□□ -1.41
Sdc1P18828 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm2693-201ENSMUST00000189119 571 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Gm17977-201ENSMUST00000198743 574 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 AC155259.1-201ENSMUST00000214794 477 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm19810-201ENSMUST00000218521 251 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Sdc1P18828 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Gm33543-202ENSMUST00000210336 1428 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms