Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm15209-201ENSMUST00000117703 400 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 n-R5s47-201ENSMUST00000122516 119 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Mir7115-201ENSMUST00000184275 64 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm20813-201ENSMUST00000186646 705 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm21923-201ENSMUST00000188455 696 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 AC163041.1-201ENSMUST00000221984 133 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 AL844586.1-201ENSMUST00000224297 1042 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 AC118249.1-201ENSMUST00000224822 608 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Mir135b-201ENSMUST00000083501 97 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm43196-201ENSMUST00000201762 2114 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Gm6284-201ENSMUST00000209609 4287 ntBASIC9.08□□□□□ -0.96
Alx1Q8C8B0 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm12219-201ENSMUST00000119198 443 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm23007-201ENSMUST00000158951 177 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm40853-201ENSMUST00000221342 582 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm9255-201ENSMUST00000223225 581 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm38315-201ENSMUST00000194286 2437 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Alx1Q8C8B0 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Gm37200-201ENSMUST00000193689 2172 ntBASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Gm23484-201ENSMUST00000104178 131 ntBASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Mir669e-201ENSMUST00000117003 119 ntBASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Gm5761-201ENSMUST00000119238 834 ntBASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Alx1Q8C8B0 Gm13622-201ENSMUST00000120658 433 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms