Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mical3-201ENSMUST00000077159 2875 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Gm35288-201ENSMUST00000216565 2731 ntTSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Ltf-201ENSMUST00000035077 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 4930533K18Rik-203ENSMUST00000219192 1307 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Platr1-201ENSMUST00000188474 3316 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Olfr1491-206ENSMUST00000216622 1725 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Ddx1-201ENSMUST00000071103 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.48□□□□□ -1.05
Sox1P53783 Ywhae-201ENSMUST00000067664 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Sox1P53783 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Pax9-203ENSMUST00000153250 4232 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Gm5862-201ENSMUST00000072286 1972 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm42944-201ENSMUST00000198383 3980 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm38252-201ENSMUST00000192701 2616 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Gm42777-201ENSMUST00000196026 3603 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm22470-201ENSMUST00000104117 130 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm13754-201ENSMUST00000120486 998 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm12163-201ENSMUST00000121597 389 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm11263-201ENSMUST00000121853 749 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Gm22226-201ENSMUST00000157355 109 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Gm28193-201ENSMUST00000189863 615 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm29605-201ENSMUST00000190800 292 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm43797-201ENSMUST00000198221 532 ntBASIC8.48□□□□□ -1.05
Sox1P53783 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Gm43992-201ENSMUST00000204358 197 ntBASIC8.48□□□□□ -1.05
Sox1P53783 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm7419-201ENSMUST00000209962 925 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC8.48□□□□□ -1.05
Sox1P53783 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.48□□□□□ -1.05
Sox1P53783 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 AC159263.2-201ENSMUST00000221593 411 ntBASIC8.48□□□□□ -1.05
Sox1P53783 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
Sox1P53783 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Sox1P53783 9030619P08Rik-201ENSMUST00000096397 857 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Olfr1043-201ENSMUST00000099907 945 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Sox1P53783 Atp7b-202ENSMUST00000110738 4044 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Aftph-209ENSMUST00000177543 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Phc1-202ENSMUST00000081849 3683 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Gm28048-201ENSMUST00000160826 2746 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Polr1b-202ENSMUST00000103205 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.48□□□□□ -1.05
Sox1P53783 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC8.48□□□□□ -1.05
Sox1P53783 Amph-204ENSMUST00000200466 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Cog4-202ENSMUST00000165867 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sox1P53783 Zmiz2-203ENSMUST00000109785 3542 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Ctnna3-201ENSMUST00000075099 2688 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Smok3b-201ENSMUST00000100537 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm10764-202ENSMUST00000220397 2335 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms