Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Gm43790-201ENSMUST00000202694 2013 ntBASIC9.05□□□□□ -0.96
LmnaP48678 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 A530021J07Rik-205ENSMUST00000208699 1717 ntTSL 5 BASIC9.05□□□□□ -0.96
LmnaP48678 Trim42-201ENSMUST00000035026 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
LmnaP48678 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
LmnaP48678 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
LmnaP48678 Gm26890-201ENSMUST00000180681 3221 ntTSL 2 BASIC9.05□□□□□ -0.96
LmnaP48678 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LmnaP48678 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Dync1i2-203ENSMUST00000112136 2548 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm44087-201ENSMUST00000204247 1770 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LmnaP48678 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
LmnaP48678 Ispd-203ENSMUST00000221177 1456 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LmnaP48678 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
LmnaP48678 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm15185-201ENSMUST00000117397 746 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm15666-201ENSMUST00000118054 976 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm13501-201ENSMUST00000118477 979 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm12003-201ENSMUST00000118518 1105 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm17097-201ENSMUST00000166414 714 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC9.04□□□□□ -0.96
LmnaP48678 2900076A07Rik-203ENSMUST00000180879 725 ntTSL 3 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm26991-201ENSMUST00000180950 620 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Gm29453-201ENSMUST00000186428 1279 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Cd209b-204ENSMUST00000188386 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm43446-201ENSMUST00000197669 1096 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm7733-201ENSMUST00000199038 919 ntBASIC9.04□□□□□ -0.96
LmnaP48678 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm29977-201ENSMUST00000206804 724 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm20074-201ENSMUST00000208144 484 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm20948-201ENSMUST00000211091 449 ntBASIC9.04□□□□□ -0.96
LmnaP48678 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm34322-201ENSMUST00000214224 719 ntTSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Calca-202ENSMUST00000032907 830 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm9234-201ENSMUST00000077747 492 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LmnaP48678 Olfr1222-201ENSMUST00000099794 936 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LmnaP48678 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Sdhaf2-201ENSMUST00000025570 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Gm18493-201ENSMUST00000192084 1612 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Pla2g6-210ENSMUST00000174021 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Agbl4-201ENSMUST00000080744 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LmnaP48678 Gm28791-201ENSMUST00000185888 1779 ntBASIC9.04□□□□□ -0.96
LmnaP48678 Ddx47-201ENSMUST00000032326 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LmnaP48678 Gm43041-201ENSMUST00000200022 2630 ntBASIC9.03□□□□□ -0.96
LmnaP48678 Gm37366-201ENSMUST00000194487 2297 ntBASIC9.03□□□□□ -0.96
LmnaP48678 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LmnaP48678 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
LmnaP48678 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC9.03□□□□□ -0.96
LmnaP48678 CT009536.1-201ENSMUST00000223774 2151 ntBASIC9.03□□□□□ -0.96
LmnaP48678 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
LmnaP48678 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LmnaP48678 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LmnaP48678 Gm17473-202ENSMUST00000228544 2071 ntBASIC9.03□□□□□ -0.96
LmnaP48678 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LmnaP48678 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LmnaP48678 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LmnaP48678 Zp2-201ENSMUST00000033207 2221 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LmnaP48678 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LmnaP48678 2610028H24Rik-201ENSMUST00000092406 1640 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LmnaP48678 Mb21d2-201ENSMUST00000100023 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms