Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Col18a1P39061 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Col18a1P39061 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Col18a1P39061 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Col18a1P39061 AC164437.4-202ENSMUST00000228794 2413 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Gm9144-201ENSMUST00000101625 1008 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Gm14787-201ENSMUST00000121236 388 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Gm15164-201ENSMUST00000122203 271 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Gm23903-201ENSMUST00000157566 131 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Gm24435-201ENSMUST00000157886 110 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Col18a1P39061 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC10.15□□□□□ -0.78
Col18a1P39061 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Gm19175-201ENSMUST00000199895 916 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC10.15□□□□□ -0.78
Col18a1P39061 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 AC122372.1-201ENSMUST00000215344 280 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 AC163667.1-201ENSMUST00000225201 1289 ntBASIC10.15□□□□□ -0.78
Col18a1P39061 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Col18a1P39061 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Col18a1P39061 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Col18a1P39061 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
Col18a1P39061 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Col18a1P39061 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Col18a1P39061 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC10.15□□□□□ -0.79
Col18a1P39061 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Col18a1P39061 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Col18a1P39061 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Col18a1P39061 Gm42811-201ENSMUST00000201951 2768 ntBASIC10.15□□□□□ -0.79
Col18a1P39061 Ddx5-201ENSMUST00000021062 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm22370-201ENSMUST00000102422 83 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm5871-201ENSMUST00000176461 718 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29048-201ENSMUST00000185342 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29403-201ENSMUST00000185491 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28234-201ENSMUST00000185657 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28248-201ENSMUST00000186093 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29633-202ENSMUST00000186217 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28829-201ENSMUST00000186231 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28261-201ENSMUST00000186417 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28983-201ENSMUST00000186685 614 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28815-201ENSMUST00000186751 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28608-201ENSMUST00000186860 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28122-201ENSMUST00000187088 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28150-201ENSMUST00000187305 614 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28420-201ENSMUST00000187340 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28106-201ENSMUST00000187640 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28698-201ENSMUST00000187734 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29224-201ENSMUST00000187965 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29189-201ENSMUST00000188018 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29476-201ENSMUST00000188397 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29505-201ENSMUST00000188424 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28125-201ENSMUST00000188470 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29391-201ENSMUST00000188545 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29280-201ENSMUST00000188571 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28349-201ENSMUST00000188590 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29652-201ENSMUST00000188622 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28819-206ENSMUST00000188816 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29079-201ENSMUST00000188875 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28213-201ENSMUST00000189183 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29382-201ENSMUST00000189549 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29377-205ENSMUST00000189603 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28327-201ENSMUST00000189638 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28790-201ENSMUST00000189642 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28907-201ENSMUST00000189700 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29586-207ENSMUST00000189745 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29115-201ENSMUST00000189870 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28366-201ENSMUST00000190147 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29212-201ENSMUST00000190384 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29533-201ENSMUST00000190403 615 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms