Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Olfr925-ps1-201ENSMUST00000217295 780 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 AC122539.2-201ENSMUST00000220207 404 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Gm33929-201ENSMUST00000221762 367 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 AC130829.2-201ENSMUST00000222931 127 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 AC125350.5-201ENSMUST00000226102 517 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Ucn2-201ENSMUST00000052724 1155 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx1P18111 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm11756-201ENSMUST00000107310 1312 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx1P18111 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Klrb1b-202ENSMUST00000172887 1416 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Pgk2-201ENSMUST00000033585 1592 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm5402-201ENSMUST00000119588 1618 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 AC122829.1-201ENSMUST00000219743 1631 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Zwint-201ENSMUST00000020081 1834 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Clmn-202ENSMUST00000109937 3529 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Cdx1P18111 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm12817-201ENSMUST00000119622 610 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Mup-ps24-201ENSMUST00000119939 286 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm5388-201ENSMUST00000120059 1117 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm6136-201ENSMUST00000120149 891 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm14984-201ENSMUST00000120343 1263 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm14143-201ENSMUST00000121686 357 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx1P18111 4933407L21Rik-202ENSMUST00000129392 503 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm13645-201ENSMUST00000145163 699 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Glyatl3-201ENSMUST00000166343 873 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm29175-201ENSMUST00000189500 402 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm35106-201ENSMUST00000192731 250 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Ighv10-2-201ENSMUST00000195182 298 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm43693-201ENSMUST00000196072 1249 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm19175-201ENSMUST00000199895 916 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 CT485606.2-201ENSMUST00000216728 401 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx1P18111 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 AC132384.10-201ENSMUST00000217862 1204 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 AC154747.2-201ENSMUST00000225109 780 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Mbl2-201ENSMUST00000025797 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm8623-201ENSMUST00000071573 436 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm7027-201ENSMUST00000086958 862 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gzmk-202ENSMUST00000122399 1304 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm45204-201ENSMUST00000206297 1354 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Trim13-201ENSMUST00000039562 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm43322-201ENSMUST00000196232 1612 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm15931-201ENSMUST00000118066 1852 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.38□□□□□ -1.39
Cdx1P18111 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx1P18111 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx1P18111 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdx1P18111 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms