Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Usp54Q8BL06 Gm37069-201ENSMUST00000192742 4142 ntBASIC10.96□□□□□ -0.66
Usp54Q8BL06 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Usp54Q8BL06 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Usp54Q8BL06 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Usp54Q8BL06 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Usp54Q8BL06 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Usp54Q8BL06 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Usp54Q8BL06 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Usp54Q8BL06 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm12477-201ENSMUST00000121221 571 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm15538-201ENSMUST00000121410 313 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm14990-201ENSMUST00000122354 445 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm17786-201ENSMUST00000182000 427 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm27178-201ENSMUST00000184962 340 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm7412-201ENSMUST00000191692 605 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 AC127224.1-201ENSMUST00000218094 453 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 AC155270.1-202ENSMUST00000221503 352 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Olfr683-201ENSMUST00000061284 960 ntBASIC10.95□□□□□ -0.66
Usp54Q8BL06 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp54Q8BL06 Gm15913-201ENSMUST00000118492 331 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm15484-201ENSMUST00000118871 828 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm26480-201ENSMUST00000122619 297 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm34583-203ENSMUST00000202586 454 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm4247-201ENSMUST00000211441 1042 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm17611-202ENSMUST00000220613 814 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 CT030182.4-201ENSMUST00000223647 645 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 AC161275.1-201ENSMUST00000224668 208 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 CT025630.2-201ENSMUST00000228293 487 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm44289-201ENSMUST00000204144 1390 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm38056-201ENSMUST00000193928 5027 ntBASIC10.94□□□□□ -0.66
Usp54Q8BL06 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Usp54Q8BL06 Gm25379-201ENSMUST00000104338 114 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms