Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm10297-201ENSMUST00000207136 651 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm45399-201ENSMUST00000209955 1016 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm45674-201ENSMUST00000210043 450 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC8.37□□□□□ -1.07
Usp4P35123 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm5789-201ENSMUST00000222643 865 ntBASIC8.37□□□□□ -1.07
Usp4P35123 AC167013.6-201ENSMUST00000226587 1067 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp4P35123 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp4P35123 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Usp4P35123 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm8394-201ENSMUST00000079684 952 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.37□□□□□ -1.07
Usp4P35123 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.36□□□□□ -1.07
Usp4P35123 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Usp4P35123 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp4P35123 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Gm12142-201ENSMUST00000117114 485 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm12075-201ENSMUST00000117426 397 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm11348-201ENSMUST00000118813 318 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC8.36□□□□□ -1.07
Usp4P35123 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp4P35123 Gm12496-201ENSMUST00000154377 668 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp4P35123 Gm17053-201ENSMUST00000163501 495 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm17158-201ENSMUST00000168150 493 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm7132-201ENSMUST00000182302 984 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm29354-201ENSMUST00000187613 696 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm37822-201ENSMUST00000192618 1109 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm42782-201ENSMUST00000197286 522 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm23604-202ENSMUST00000198428 137 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Gm44554-201ENSMUST00000208738 147 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Gm4178-201ENSMUST00000218307 649 ntBASIC8.36□□□□□ -1.07
Usp4P35123 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.36□□□□□ -1.07
Usp4P35123 AC139758.2-201ENSMUST00000228380 529 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC8.36□□□□□ -1.07
Usp4P35123 Olfr1255-201ENSMUST00000057369 933 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp4P35123 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.36□□□□□ -1.07
Usp4P35123 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Usp4P35123 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp4P35123 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp4P35123 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.36□□□□□ -1.07
Usp4P35123 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp4P35123 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Gm43314-201ENSMUST00000196744 2231 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp4P35123 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 AC162467.2-201ENSMUST00000219397 2571 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp4P35123 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp4P35123 Lipc-204ENSMUST00000216798 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp4P35123 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms