Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Cdx1P18111 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Tmem87a-202ENSMUST00000090046 2897 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 AC154227.2-201ENSMUST00000228677 2101 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm25803-201ENSMUST00000104419 131 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm12518-201ENSMUST00000122075 779 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Gm11203-201ENSMUST00000122169 741 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Dlx1as-203ENSMUST00000140271 700 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm22014-201ENSMUST00000158785 290 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Nip7-202ENSMUST00000170962 606 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm20451-201ENSMUST00000173452 273 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Mir7115-201ENSMUST00000184275 64 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Gm27406-201ENSMUST00000184881 182 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Gm28419-201ENSMUST00000189108 475 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Gm29188-201ENSMUST00000191173 767 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm44451-201ENSMUST00000203767 483 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Gm30781-201ENSMUST00000204743 216 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdx1P18111 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm45213-201ENSMUST00000206065 304 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm7546-202ENSMUST00000211354 275 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 AC164105.1-202ENSMUST00000213920 999 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 AC091683.2-201ENSMUST00000222996 1185 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdx1P18111 Tssk4-207ENSMUST00000228395 1273 ntAPPRIS P5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdx1P18111 Gm24826-201ENSMUST00000083695 215 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Mir484-201ENSMUST00000093566 67 ntBASIC6.4□□□□□ -1.38
Cdx1P18111 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdx1P18111 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx1P18111 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx1P18111 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdx1P18111 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cdx1P18111 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx1P18111 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx1P18111 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx1P18111 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cdx1P18111 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx1P18111 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Cdx1P18111 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdx1P18111 AC126028.1-201ENSMUST00000226218 2123 ntBASIC6.4□□□□□ -1.39
Cdx1P18111 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Cdx1P18111 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Cdx1P18111 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Cdx1P18111 n-R5s102-201ENSMUST00000101990 119 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Slc50a1-202ENSMUST00000107460 785 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm14994-201ENSMUST00000117482 1092 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Mageb7-ps-201ENSMUST00000118274 1041 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 4930417H01Rik-201ENSMUST00000123403 1233 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Gm15879-201ENSMUST00000139334 809 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx1P18111 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx1P18111 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdx1P18111 n-R5s101-201ENSMUST00000177910 119 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 n-R5s114-201ENSMUST00000178297 119 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 n-R5s119-201ENSMUST00000178861 119 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 n-R5s127-201ENSMUST00000179185 119 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Gm23945-201ENSMUST00000179609 92 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 n-R5s129-201ENSMUST00000180122 119 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 n-R5s131-201ENSMUST00000180280 119 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Gm37904-201ENSMUST00000195591 312 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Mark4-ps-201ENSMUST00000196140 384 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Gm42441-201ENSMUST00000199778 748 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Gm42557-201ENSMUST00000202037 582 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdx1P18111 Gm8479-202ENSMUST00000204366 1070 ntBASIC6.39□□□□□ -1.39
Cdx1P18111 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms