Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm38328-201ENSMUST00000195582 317 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcn1Q64347 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Gm44282-201ENSMUST00000203199 190 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 AC124542.1-201ENSMUST00000205588 908 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Gm38405-201ENSMUST00000207760 1140 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcn1Q64347 Gm6579-201ENSMUST00000208224 865 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 AC139845.2-201ENSMUST00000227504 436 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Vmn1r193-201ENSMUST00000057516 960 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcn1Q64347 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Mir24-2-201ENSMUST00000083607 107 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Gm8173-201ENSMUST00000186797 1977 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcn1Q64347 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Gm15533-202ENSMUST00000206216 3262 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clcn1Q64347 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Clcn1Q64347 AC156025.3-201ENSMUST00000225919 3095 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Gm28791-201ENSMUST00000185888 1779 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Tsr2-201ENSMUST00000026295 3804 ntTSL 2 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Aox3-205ENSMUST00000162011 1568 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clcn1Q64347 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 4632432E15Rik-201ENSMUST00000191824 2439 ntBASIC10.82□□□□□ -0.68
Clcn1Q64347 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Clcn1Q64347 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Hnrnpc-209ENSMUST00000228198 2498 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm43790-201ENSMUST00000202694 2013 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Blzf1-201ENSMUST00000027866 3948 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Ctf2-201ENSMUST00000076091 1754 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm5393-201ENSMUST00000119106 272 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm12877-201ENSMUST00000120383 510 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm13502-201ENSMUST00000121574 684 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm15079-201ENSMUST00000121943 216 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm16026-202ENSMUST00000159695 772 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm7031-201ENSMUST00000173709 919 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm9399-201ENSMUST00000175771 639 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm36398-201ENSMUST00000192255 696 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm30312-201ENSMUST00000194516 696 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm35570-201ENSMUST00000198730 681 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm42472-201ENSMUST00000201626 859 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm44988-201ENSMUST00000203835 1161 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm7333-201ENSMUST00000213449 1060 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 AC159819.1-201ENSMUST00000213911 328 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC10.81□□□□□ -0.68
Clcn1Q64347 AC125019.1-201ENSMUST00000224809 908 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 AC139294.2-201ENSMUST00000227159 285 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 AC102603.1-201ENSMUST00000227481 584 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Olfr90-201ENSMUST00000070808 1046 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Clcn1Q64347 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Ceacam19-201ENSMUST00000052605 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Pilrb1-206ENSMUST00000199387 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm28653-201ENSMUST00000185494 5276 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Hnrnpk-224ENSMUST00000224182 2754 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Clcn1Q64347 AC187103.1-201ENSMUST00000224641 1475 ntBASIC10.81□□□□□ -0.68
Clcn1Q64347 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clcn1Q64347 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clcn1Q64347 Zc3h3-201ENSMUST00000100538 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clcn1Q64347 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clcn1Q64347 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clcn1Q64347 AC142266.1-202ENSMUST00000227784 3733 ntBASIC10.8□□□□□ -0.68
Clcn1Q64347 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clcn1Q64347 Gm37649-201ENSMUST00000192079 2232 ntBASIC10.8□□□□□ -0.68
Clcn1Q64347 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clcn1Q64347 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clcn1Q64347 Olfr914-202ENSMUST00000217057 4948 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Clcn1Q64347 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 277.3 ms