Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC10.2□□□□□ -0.78
Col18a1P39061 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Atp7b-202ENSMUST00000110738 4044 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm16073-201ENSMUST00000116032 517 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm15192-201ENSMUST00000121005 293 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm12778-201ENSMUST00000122341 333 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC10.19□□□□□ -0.78
Col18a1P39061 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm9357-201ENSMUST00000207138 805 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm2975-201ENSMUST00000209710 820 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm18377-201ENSMUST00000215141 607 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Col18a1P39061 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC10.19□□□□□ -0.78
Col18a1P39061 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
Col18a1P39061 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Col18a1P39061 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.19□□□□□ -0.78
Col18a1P39061 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm19210-201ENSMUST00000199562 1350 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Cpne5-201ENSMUST00000024805 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Cep63-206ENSMUST00000162655 4180 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Dhx30-203ENSMUST00000165596 3726 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm26416-201ENSMUST00000104280 134 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm23768-201ENSMUST00000104440 131 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm13622-201ENSMUST00000120658 433 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm15188-201ENSMUST00000121264 704 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC10.19□□□□□ -0.78
Col18a1P39061 Gm37436-201ENSMUST00000193842 1085 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Gm2040-201ENSMUST00000202979 289 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Zfp865-202ENSMUST00000076791 1129 ntBASIC10.19□□□□□ -0.78
Col18a1P39061 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Col18a1P39061 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col18a1P39061 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.18□□□□□ -0.78
Col18a1P39061 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC10.18□□□□□ -0.78
Col18a1P39061 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Gm37373-201ENSMUST00000194005 2812 ntBASIC10.18□□□□□ -0.78
Col18a1P39061 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Gm38288-201ENSMUST00000195330 1320 ntBASIC10.18□□□□□ -0.78
Col18a1P39061 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Col18a1P39061 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Col18a1P39061 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Col18a1P39061 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Col18a1P39061 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Gm9423-201ENSMUST00000183173 997 ntBASIC10.18□□□□□ -0.78
Col18a1P39061 Gm8575-201ENSMUST00000210262 521 ntBASIC10.18□□□□□ -0.78
Col18a1P39061 Gm18620-201ENSMUST00000222295 324 ntBASIC10.18□□□□□ -0.78
Col18a1P39061 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Col18a1P39061 Syt17-201ENSMUST00000081574 2764 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col18a1P39061 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms