Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm42490-201ENSMUST00000198595 2064 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm37321-201ENSMUST00000195742 1872 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm43670-201ENSMUST00000199047 1767 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm18639-201ENSMUST00000210442 1769 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Dennd6a-205ENSMUST00000224378 2424 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm37334-201ENSMUST00000192325 2938 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm14860-201ENSMUST00000120277 429 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm5931-201ENSMUST00000121308 477 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm24923-201ENSMUST00000178201 88 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm8266-201ENSMUST00000179745 1192 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm29126-201ENSMUST00000188686 151 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm43806-201ENSMUST00000201766 469 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm19810-201ENSMUST00000218521 251 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 AC155834.1-201ENSMUST00000220033 498 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm21941-201ENSMUST00000221121 562 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC7□□□□□ -1.29
Scrt1Q99M85 AC192333.4-201ENSMUST00000224269 981 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 CT025630.3-201ENSMUST00000228798 835 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7□□□□□ -1.29
Scrt1Q99M85 Olfr1333-201ENSMUST00000076019 954 ntAPPRIS P2 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm26244-201ENSMUST00000083435 164 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC7□□□□□ -1.29
Scrt1Q99M85 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Hdhd2-208ENSMUST00000148955 3069 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Scrt1Q99M85 Gm38386-201ENSMUST00000194293 3421 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 AC105958.1-201ENSMUST00000214783 2144 ntBASIC7□□□□□ -1.29
Scrt1Q99M85 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Scrt1Q99M85 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7□□□□□ -1.29
Scrt1Q99M85 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Scrt1Q99M85 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm11907-201ENSMUST00000118918 1007 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm13915-201ENSMUST00000119314 931 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms