Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm9723-201ENSMUST00000192100 457 ntBASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm6197-201ENSMUST00000192273 454 ntBASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm8575-201ENSMUST00000210262 521 ntBASIC11.07□□□□□ -0.64
Usp47Q8BY87 AC134414.1-201ENSMUST00000228499 1221 ntBASIC11.07□□□□□ -0.64
Usp47Q8BY87 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Gm5386-201ENSMUST00000121749 2450 ntBASIC11.07□□□□□ -0.64
Usp47Q8BY87 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp47Q8BY87 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm11585-201ENSMUST00000120901 569 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm20797-201ENSMUST00000177894 383 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm42932-201ENSMUST00000197280 744 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm43108-201ENSMUST00000200525 293 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm44380-201ENSMUST00000203125 293 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm42907-201ENSMUST00000199793 2148 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 AC168056.4-201ENSMUST00000223835 2567 ntBASIC11.06□□□□□ -0.64
Usp47Q8BY87 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp47Q8BY87 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm15047-201ENSMUST00000118891 454 ntBASIC11.05□□□□□ -0.64
Usp47Q8BY87 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm27458-201ENSMUST00000185108 121 ntBASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm43590-201ENSMUST00000195987 387 ntBASIC11.05□□□□□ -0.64
Usp47Q8BY87 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm43560-201ENSMUST00000198100 773 ntBASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm18765-201ENSMUST00000203166 660 ntBASIC11.05□□□□□ -0.64
Usp47Q8BY87 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm38339-201ENSMUST00000195479 1829 ntBASIC11.05□□□□□ -0.64
Usp47Q8BY87 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Gm7562-201ENSMUST00000210502 2537 ntBASIC11.05□□□□□ -0.64
Usp47Q8BY87 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms