Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn9Q9Z0S7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn9Q9Z0S7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Reep4-203ENSMUST00000226563 1444 ntBASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn9Q9Z0S7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn9Q9Z0S7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn9Q9Z0S7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Cldn9Q9Z0S7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms