Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NcdnQ9Z0E0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcdnQ9Z0E0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NcdnQ9Z0E0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NcdnQ9Z0E0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcdnQ9Z0E0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NcdnQ9Z0E0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NcdnQ9Z0E0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.59■□□□□ 0.57
NcdnQ9Z0E0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NcdnQ9Z0E0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.59■□□□□ 0.57
NcdnQ9Z0E0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NcdnQ9Z0E0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NcdnQ9Z0E0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.58■□□□□ 0.57
NcdnQ9Z0E0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NcdnQ9Z0E0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.58■□□□□ 0.56
NcdnQ9Z0E0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NcdnQ9Z0E0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NcdnQ9Z0E0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NcdnQ9Z0E0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NcdnQ9Z0E0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcdnQ9Z0E0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcdnQ9Z0E0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcdnQ9Z0E0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcdnQ9Z0E0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms