Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.27■□□□□ 0.68
Snx1Q9WV80 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx1Q9WV80 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Snx1Q9WV80 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Snx1Q9WV80 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Snx1Q9WV80 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Snx1Q9WV80 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Snx1Q9WV80 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx1Q9WV80 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.25■□□□□ 0.67
Snx1Q9WV80 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Snx1Q9WV80 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx1Q9WV80 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Snx1Q9WV80 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.24■□□□□ 0.67
Snx1Q9WV80 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Snx1Q9WV80 Gm12922-201ENSMUST00000120626 809 ntBASIC19.23■□□□□ 0.67
Snx1Q9WV80 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Snx1Q9WV80 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx1Q9WV80 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
Snx1Q9WV80 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx1Q9WV80 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.23■□□□□ 0.67
Snx1Q9WV80 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx1Q9WV80 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.23■□□□□ 0.67
Snx1Q9WV80 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.22■□□□□ 0.67
Snx1Q9WV80 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx1Q9WV80 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx1Q9WV80 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx1Q9WV80 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms