Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ClcnkaQ9WUB7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClcnkaQ9WUB7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClcnkaQ9WUB7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Gm5874-201ENSMUST00000096101 508 ntBASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClcnkaQ9WUB7 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.11■□□□□ 0.33
ClcnkaQ9WUB7 Gm13234-201ENSMUST00000120010 747 ntBASIC17.11■□□□□ 0.33
ClcnkaQ9WUB7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClcnkaQ9WUB7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClcnkaQ9WUB7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ClcnkaQ9WUB7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClcnkaQ9WUB7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClcnkaQ9WUB7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClcnkaQ9WUB7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Gm18284-201ENSMUST00000172604 624 ntBASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ClcnkaQ9WUB7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ClcnkaQ9WUB7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ClcnkaQ9WUB7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms