Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Gm15820-201ENSMUST00000201566 728 ntBASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4bQ9ES00 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4bQ9ES00 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4bQ9ES00 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube4bQ9ES00 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Gm15546-201ENSMUST00000122095 826 ntBASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube4bQ9ES00 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms