Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtp4Q9ER80 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtp4Q9ER80 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtp4Q9ER80 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtp4Q9ER80 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtp4Q9ER80 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.4■□□□□ 0.38
Rtp4Q9ER80 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Mir5133-201ENSMUST00000174955 77 ntBASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtp4Q9ER80 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtp4Q9ER80 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtp4Q9ER80 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.39■□□□□ 0.37
Rtp4Q9ER80 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtp4Q9ER80 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms