Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdc40Q9DC48 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Cdc40Q9DC48 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdc40Q9DC48 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdc40Q9DC48 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdc40Q9DC48 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdc40Q9DC48 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdc40Q9DC48 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Cdc40Q9DC48 Gm38205-201ENSMUST00000192243 258 ntBASIC17.27■□□□□ 0.36
Cdc40Q9DC48 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdc40Q9DC48 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdc40Q9DC48 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdc40Q9DC48 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.27■□□□□ 0.35
Cdc40Q9DC48 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdc40Q9DC48 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdc40Q9DC48 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Mir5133-201ENSMUST00000174955 77 ntBASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc40Q9DC48 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc40Q9DC48 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc40Q9DC48 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc40Q9DC48 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc40Q9DC48 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc40Q9DC48 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms