Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2aQ9DB34 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2aQ9DB34 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2aQ9DB34 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Gm13534-201ENSMUST00000121169 513 ntBASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2aQ9DB34 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2aQ9DB34 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp2aQ9DB34 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp2aQ9DB34 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chmp2aQ9DB34 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms