Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd1Q9D0E3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd1Q9D0E3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd1Q9D0E3 Mir3081-201ENSMUST00000175305 84 ntBASIC20.17■□□□□ 0.82
Lysmd1Q9D0E3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd1Q9D0E3 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.17■□□□□ 0.82
Lysmd1Q9D0E3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.17■□□□□ 0.82
Lysmd1Q9D0E3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd1Q9D0E3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd1Q9D0E3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lysmd1Q9D0E3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd1Q9D0E3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
Lysmd1Q9D0E3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd1Q9D0E3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Gm5864-201ENSMUST00000202263 970 ntBASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd1Q9D0E3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Gm27525-201ENSMUST00000184465 107 ntBASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Zfp783-201ENSMUST00000095946 670 ntBASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd1Q9D0E3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Gm17808-201ENSMUST00000200859 894 ntBASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.11■□□□□ 0.81
Lysmd1Q9D0E3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd1Q9D0E3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Gm9013-201ENSMUST00000132939 882 ntBASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms