Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc43Q9CR29 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc43Q9CR29 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc43Q9CR29 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc43Q9CR29 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc43Q9CR29 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc43Q9CR29 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms