Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.44■□□□□ 0.7
Q9CQC3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CQC3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CQC3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.44■□□□□ 0.7
Q9CQC3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CQC3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CQC3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.44■□□□□ 0.7
Q9CQC3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CQC3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CQC3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CQC3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Q9CQC3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.43■□□□□ 0.7
Q9CQC3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Q9CQC3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CQC3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.42■□□□□ 0.7
Q9CQC3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Q9CQC3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.42■□□□□ 0.7
Q9CQC3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CQC3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Q9CQC3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
Q9CQC3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.41■□□□□ 0.7
Q9CQC3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.41■□□□□ 0.7
Q9CQC3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CQC3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CQC3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CQC3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CQC3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Q9CQC3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CQC3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Q9CQC3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.4■□□□□ 0.7
Q9CQC3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.4■□□□□ 0.7
Q9CQC3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.4■□□□□ 0.7
Q9CQC3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Q9CQC3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CQC3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Q9CQC3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Q9CQC3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.39■□□□□ 0.69
Q9CQC3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CQC3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Q9CQC3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Q9CQC3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.38■□□□□ 0.69
Q9CQC3 AV356131-201ENSMUST00000206201 750 ntBASIC19.38■□□□□ 0.69
Q9CQC3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CQC3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Q9CQC3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q9CQC3 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.37■□□□□ 0.69
Q9CQC3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9CQC3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9CQC3 Gm10849-201ENSMUST00000100397 618 ntBASIC19.37■□□□□ 0.69
Q9CQC3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.37■□□□□ 0.69
Q9CQC3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.37■□□□□ 0.69
Q9CQC3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Q9CQC3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms