Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpa3Q9CQ71 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Gm7514-201ENSMUST00000209475 934 ntBASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa3Q9CQ71 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Gm42569-201ENSMUST00000200539 472 ntBASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa3Q9CQ71 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa3Q9CQ71 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Gm26571-201ENSMUST00000181399 666 ntBASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rpa3Q9CQ71 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 BC021767-201ENSMUST00000126387 1716 ntBASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Gm10849-201ENSMUST00000100397 618 ntBASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpa3Q9CQ71 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpa3Q9CQ71 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa3Q9CQ71 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa3Q9CQ71 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms