Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-1Q99MA9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-1Q99MA9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-1Q99MA9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-1Q99MA9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-1Q99MA9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Gm10819-201ENSMUST00000099988 561 ntBASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-1Q99MA9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Gm21362-201ENSMUST00000194272 928 ntBASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.48■□□□□ 0.39
Nkx6-1Q99MA9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-1Q99MA9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-1Q99MA9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx6-1Q99MA9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms