Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scrt1Q99M85 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scrt1Q99M85 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.33■□□□□ 0.2
Scrt1Q99M85 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scrt1Q99M85 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.33■□□□□ 0.2
Scrt1Q99M85 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scrt1Q99M85 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scrt1Q99M85 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.31■□□□□ 0.2
Scrt1Q99M85 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scrt1Q99M85 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scrt1Q99M85 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Gm5643-201ENSMUST00000117081 966 ntBASIC16.29■□□□□ 0.2
Scrt1Q99M85 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Gm6576-201ENSMUST00000169678 883 ntBASIC16.29■□□□□ 0.2
Scrt1Q99M85 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Scrt1Q99M85 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scrt1Q99M85 Golph3-205ENSMUST00000228671 2842 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms