Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.37■□□□□ 0.69
Lysmd3Q99LE3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lysmd3Q99LE3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd3Q99LE3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.34■□□□□ 0.69
Lysmd3Q99LE3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd3Q99LE3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd3Q99LE3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd3Q99LE3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd3Q99LE3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd3Q99LE3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Gm26524-201ENSMUST00000192339 390 ntBASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd3Q99LE3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd3Q99LE3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd3Q99LE3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms