Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TrabdQ99JY4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TrabdQ99JY4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TrabdQ99JY4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TrabdQ99JY4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TrabdQ99JY4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.44■□□□□ 0.7
TrabdQ99JY4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.44■□□□□ 0.7
TrabdQ99JY4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Gm20049-201ENSMUST00000219950 730 ntBASIC19.44■□□□□ 0.7
TrabdQ99JY4 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.44■□□□□ 0.7
TrabdQ99JY4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.44■□□□□ 0.7
TrabdQ99JY4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.43■□□□□ 0.7
TrabdQ99JY4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TrabdQ99JY4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.42■□□□□ 0.7
TrabdQ99JY4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Gm12527-201ENSMUST00000117967 564 ntBASIC19.42■□□□□ 0.7
TrabdQ99JY4 Gm10653-202ENSMUST00000139570 835 ntBASIC19.42■□□□□ 0.7
TrabdQ99JY4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TrabdQ99JY4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TrabdQ99JY4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TrabdQ99JY4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.41■□□□□ 0.7
TrabdQ99JY4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TrabdQ99JY4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TrabdQ99JY4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TrabdQ99JY4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TrabdQ99JY4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TrabdQ99JY4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TrabdQ99JY4 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.41■□□□□ 0.7
TrabdQ99JY4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.4■□□□□ 0.7
TrabdQ99JY4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TrabdQ99JY4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TrabdQ99JY4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
TrabdQ99JY4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TrabdQ99JY4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TrabdQ99JY4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TrabdQ99JY4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.39■□□□□ 0.69
TrabdQ99JY4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TrabdQ99JY4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TrabdQ99JY4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TrabdQ99JY4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TrabdQ99JY4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms