Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdha1Q91Y21 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdha1Q91Y21 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha1Q91Y21 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha1Q91Y21 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha1Q91Y21 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.46■□□□□ 0.71
Pcdha1Q91Y21 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha1Q91Y21 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha1Q91Y21 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Gm26524-201ENSMUST00000192339 390 ntBASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha1Q91Y21 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdha1Q91Y21 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Gm20049-201ENSMUST00000219950 730 ntBASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha1Q91Y21 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Gm20760-201ENSMUST00000179197 648 ntBASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha1Q91Y21 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha1Q91Y21 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms