Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Gm40848-201ENSMUST00000221998 324 ntBASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb4Q91XZ6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhb4Q91XZ6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhb4Q91XZ6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb4Q91XZ6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Gm7860-201ENSMUST00000121190 879 ntBASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb4Q91XZ6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.46■□□□□ 0.54
Pcdhb4Q91XZ6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Pcdhb4Q91XZ6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb4Q91XZ6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms