Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga11Q91XY8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Gm40848-201ENSMUST00000221998 324 ntBASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga11Q91XY8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.94■□□□□ 0.46
Pcdhga11Q91XY8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.93■□□□□ 0.46
Pcdhga11Q91XY8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Gm43060-201ENSMUST00000200621 289 ntBASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhga11Q91XY8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms