Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb1Q91XX8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb1Q91XX8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb1Q91XX8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb1Q91XX8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb1Q91XX8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhgb1Q91XX8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.35■□□□□ 0.69
Pcdhgb1Q91XX8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb1Q91XX8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb1Q91XX8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb1Q91XX8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhgb1Q91XX8 Gm26524-201ENSMUST00000192339 390 ntBASIC19.33■□□□□ 0.68
Pcdhgb1Q91XX8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.33■□□□□ 0.68
Pcdhgb1Q91XX8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb1Q91XX8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb1Q91XX8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Golph3-205ENSMUST00000228671 2842 ntBASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Gm20049-201ENSMUST00000219950 730 ntBASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms