Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
StrcQ8VIM6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
StrcQ8VIM6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
StrcQ8VIM6 Gm6345-202ENSMUST00000180900 204 ntBASIC22.66■■□□□ 1.22
StrcQ8VIM6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Gm23634-201ENSMUST00000175071 91 ntBASIC22.66■■□□□ 1.22
StrcQ8VIM6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
StrcQ8VIM6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
StrcQ8VIM6 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.65■■□□□ 1.22
StrcQ8VIM6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.65■■□□□ 1.22
StrcQ8VIM6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
StrcQ8VIM6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
StrcQ8VIM6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
StrcQ8VIM6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
StrcQ8VIM6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.64■■□□□ 1.22
StrcQ8VIM6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
StrcQ8VIM6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.64■■□□□ 1.21
StrcQ8VIM6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
StrcQ8VIM6 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.63■■□□□ 1.21
StrcQ8VIM6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.63■■□□□ 1.21
StrcQ8VIM6 Gm10138-203ENSMUST00000206952 366 ntBASIC22.63■■□□□ 1.21
StrcQ8VIM6 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.63■■□□□ 1.21
StrcQ8VIM6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
StrcQ8VIM6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
StrcQ8VIM6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
StrcQ8VIM6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
StrcQ8VIM6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
StrcQ8VIM6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Gm33142-201ENSMUST00000193913 867 ntBASIC22.62■■□□□ 1.21
StrcQ8VIM6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
StrcQ8VIM6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
StrcQ8VIM6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
StrcQ8VIM6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.6■■□□□ 1.21
StrcQ8VIM6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.6■■□□□ 1.21
StrcQ8VIM6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC22.6■■□□□ 1.21
StrcQ8VIM6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
StrcQ8VIM6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.6■■□□□ 1.21
StrcQ8VIM6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
StrcQ8VIM6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
StrcQ8VIM6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
StrcQ8VIM6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
StrcQ8VIM6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
StrcQ8VIM6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC22.58■■□□□ 1.21
StrcQ8VIM6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
StrcQ8VIM6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
StrcQ8VIM6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
StrcQ8VIM6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
StrcQ8VIM6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
StrcQ8VIM6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Gm10013-201ENSMUST00000106074 672 ntBASIC22.57■■□□□ 1.2
StrcQ8VIM6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
StrcQ8VIM6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms