Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr1Q8VHP6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr1Q8VHP6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Gm12896-201ENSMUST00000118430 226 ntBASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr1Q8VHP6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Cdhr1Q8VHP6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Cdhr1Q8VHP6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.15■□□□□ 0.5
Cdhr1Q8VHP6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdhr1Q8VHP6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdhr1Q8VHP6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms