Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc39cQ8VE09 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc39cQ8VE09 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Gm12441-201ENSMUST00000121806 588 ntBASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc39cQ8VE09 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.14■□□□□ 0.66
Ttc39cQ8VE09 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc39cQ8VE09 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc39cQ8VE09 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc39cQ8VE09 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Gm4968-201ENSMUST00000071458 858 ntBASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc39cQ8VE09 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc39cQ8VE09 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ttc39cQ8VE09 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc39cQ8VE09 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc39cQ8VE09 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ttc39cQ8VE09 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ttc39cQ8VE09 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms