Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp40Q8R1F9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp40Q8R1F9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rpp40Q8R1F9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpp40Q8R1F9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Rpp40Q8R1F9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpp40Q8R1F9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Rpp40Q8R1F9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpp40Q8R1F9 Gm5408-201ENSMUST00000197998 747 ntBASIC20.01■□□□□ 0.79
Rpp40Q8R1F9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpp40Q8R1F9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpp40Q8R1F9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Gm26524-201ENSMUST00000192339 390 ntBASIC20■□□□□ 0.79
Rpp40Q8R1F9 Gm3807-201ENSMUST00000193520 1168 ntBASIC20■□□□□ 0.79
Rpp40Q8R1F9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Gm4968-201ENSMUST00000071458 858 ntBASIC20■□□□□ 0.79
Rpp40Q8R1F9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpp40Q8R1F9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpp40Q8R1F9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms