Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 AC107452.1-201ENSMUST00000227963 481 ntBASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Gm9987-201ENSMUST00000069768 567 ntBASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4rl1Q8K0S5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Mir5122-201ENSMUST00000175004 89 ntBASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Mtag2-201ENSMUST00000058665 714 ntBASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rtn4rl1Q8K0S5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Gm11643-201ENSMUST00000119578 864 ntBASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4rl1Q8K0S5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn4rl1Q8K0S5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn4rl1Q8K0S5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn4rl1Q8K0S5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn4rl1Q8K0S5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Rtn4rl1Q8K0S5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn4rl1Q8K0S5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn4rl1Q8K0S5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn4rl1Q8K0S5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn4rl1Q8K0S5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4rl1Q8K0S5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.93■□□□□ 0.62
Rtn4rl1Q8K0S5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms